CDS

Accession Number TCMCG007C54068
gbkey CDS
Protein Id XP_009113927.2
Location complement(13232775..13234532)
Gene LOC103839188
GeneID 103839188
Organism Brassica rapa

Protein

Length 585aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009115679.3
Definition eukaryotic translation initiation factor 3 subunit D [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category J
Description mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7-methylguanosine cap of a subset of mRNAs
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03012        [VIEW IN KEGG]
KEGG_ko ko:K03251        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003743        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004721        [VIEW IN EMBL-EBI]
GO:0004722        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005789        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005852        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006413        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006470        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0008135        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009639        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010017        [VIEW IN EMBL-EBI]
GO:0010019        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010038        [VIEW IN EMBL-EBI]
GO:0010380        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016021        [VIEW IN EMBL-EBI]
GO:0016311        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0016791        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0030176        [VIEW IN EMBL-EBI]
GO:0031224        [VIEW IN EMBL-EBI]
GO:0031227        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042175        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042578        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044432        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046686        [VIEW IN EMBL-EBI]
GO:0046906        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051193        [VIEW IN EMBL-EBI]
GO:0051195        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071478        [VIEW IN EMBL-EBI]
GO:0071482        [VIEW IN EMBL-EBI]
GO:0071489        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090056        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098827        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901401        [VIEW IN EMBL-EBI]
GO:1901402        [VIEW IN EMBL-EBI]
GO:1901463        [VIEW IN EMBL-EBI]
GO:1901464        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902325        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTGTTCGAAGCATTCGAAGTCGTCACCGTACCTTTCAACACCGATGGCTGGGGTCCTCCAGACGCCTCCGACACTTCCTCCTCCGCTTCCTCCACCAGCGTCGCGGCCGCGAATCTCCTCCCTAACGTTCCCCTGGGCTCCTTCTCCCGCGCCGAGAAGCTAGGACGCGTCGCCGATTGGACTCGAGCTCTCTCCAACCCCTCCGCTCGTCCCCCCACCGGATCCAAATCCGATCCCTCCTCCATCTTCGATTTCTCCGCTTTCGCCGTGGACGAAGGCTTCGGCCTCGCAAACTCCTCCGGAAACGCCGACGAAGACGCAGCTTTCCGATTAGTCGACGGCAAGCCACCGCCGCGTCCTCGATTCGGACCTAAGTGGAGATTCAACAACTTCCACAACCGCAACCAGCTCCCTCAGCGCCGCGACGAGGAGGTCGAAGCGAAGAAACGCGAAGCTGAGAAGGATCGAGCTCGTCGCGATCGTCTCTACAACAACAACCGTAACAACCTCCACCACCAGCGCCGCGAAGCCGCCGCGTTCAAGTCGTCGGTCGATATACAGCCAGAGTGGAACATGCTCGAGCAGATCCCATTCTCGTCTTTCTCCAAGCTCTCGTTCACGGTCCAGGAGCCGGAGGATCTTCTCCTGTGCGGTGGACTCGAGTCTTACGATCGGAGTTACGATCGCATCACTCCCAAGGCTGAACGTCGTCTCGAGCGTTTCAAGAACCGTAGCTTCAAGGTCACAACAAGCGACGATGACGTCATCAGGCGTTTGGCTAAGGAGGATAAAGCTACTGTGTTTGCAACTGACGCTATCTTGGCTGCGCTCATGTGCGCTCCTAGGTCGGTGTACTCGTGGGATCTTGTTATACAGCGCGTAGGGAACAAGCTCTTCTTCGATAAGAGGGATGGTTCTCCTCTGGATCTGTTGTCCGTTCACGAGACTTCTCAGGAGCCGTTGCCTGAAGGGAAGGACGATATCAACTCTGCTCATTCTCTAGGCCTTGAGGCGGCTTTCATCAACCAGAACTTCGCTCAGCAGGTTTTGGTTAAGAACGGGAAGAGAGAAGCTTTCGATGAGCCGATTCCTAATGTGAACGAAGGTGAAGAGAATGCTTCTGTTGCTTATAGGTACAGGAGATGGAAGCTGGATGATAGTATGTATCTGGTTGCTAGGTGTGAGTTACAGAGCACTGTTGATCTCAACAACCAGAAGTCGTTCCTCACTCTGAATGCTCTTAACGAGTTTGATCCGAAGTACTCTGGTGTTGATTGGAGGCAGAAGCTGGAGACTCAGAGAGGTGCGGTTTTGGCTAACGAGTTGAAGAACAATGGTAATAAGCTGGCTAAGTGGACCGCGCAGGCTCTTTTGGCTAATGCGGATATGATGAAGATTGGTTTTGTTTCTAGGGTTCATCCTCGTGACCATTTTAACCATGTGATACTGTCGGTTCTGGGGTATAAGCCGAAGGATTTCGCTGGGCAGATCAATCTGAATACTTTGAACATGTGGGGAATTGTGAAGTCGATTGTTGATCTGTGTATGAAGCTGAGTGAAGGGAAGTATGTTCTTGTTAAGGATCCGTCCAAGCCTCAGGTTAGGATTTACGAGGTTCCGGCTGATGCTTTTGAGAATGATTATGTTGAAGAGCCTCTCCCTGAGGATGAGCAGGTTCAGCCACCTGAGGAGAGTAGCACTGAAGCAGAGACTAATGGAGCTGCAGAGGATAAGAAACCCGAAGGTCATGCTTGA
Protein:  
MVFEAFEVVTVPFNTDGWGPPDASDTSSSASSTSVAAANLLPNVPLGSFSRAEKLGRVADWTRALSNPSARPPTGSKSDPSSIFDFSAFAVDEGFGLANSSGNADEDAAFRLVDGKPPPRPRFGPKWRFNNFHNRNQLPQRRDEEVEAKKREAEKDRARRDRLYNNNRNNLHHQRREAAAFKSSVDIQPEWNMLEQIPFSSFSKLSFTVQEPEDLLLCGGLESYDRSYDRITPKAERRLERFKNRSFKVTTSDDDVIRRLAKEDKATVFATDAILAALMCAPRSVYSWDLVIQRVGNKLFFDKRDGSPLDLLSVHETSQEPLPEGKDDINSAHSLGLEAAFINQNFAQQVLVKNGKREAFDEPIPNVNEGEENASVAYRYRRWKLDDSMYLVARCELQSTVDLNNQKSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLANELKNNGNKLAKWTAQALLANADMMKIGFVSRVHPRDHFNHVILSVLGYKPKDFAGQINLNTLNMWGIVKSIVDLCMKLSEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEDEQVQPPEESSTEAETNGAAEDKKPEGHA